lib5c
lib5c.algorithms
lib5c.algorithms.clustering
lib5c.algorithms.clustering.adjacency
lib5c.algorithms.clustering.enclave
lib5c.algorithms.clustering.greedy
lib5c.algorithms.clustering.knn
lib5c.algorithms.clustering.quasicontiguity
lib5c.algorithms.clustering.util
lib5c.algorithms.clustering.valley
lib5c.algorithms.convergency
lib5c.algorithms.correlation
lib5c.algorithms.determine_bins
lib5c.algorithms.donut_filters
lib5c.algorithms.enrichment
lib5c.algorithms.expected
lib5c.algorithms.express
lib5c.algorithms.filtering
lib5c.algorithms.filtering.bin_bin_filtering
lib5c.algorithms.filtering.filter_functions
lib5c.algorithms.filtering.fragment_bin_filtering
lib5c.algorithms.filtering.fragment_fragment_filtering
lib5c.algorithms.filtering.unsmoothable_columns
lib5c.algorithms.filtering.util
lib5c.algorithms.knight_ruiz
lib5c.algorithms.outliers
lib5c.algorithms.pca
lib5c.algorithms.qnorm
lib5c.algorithms.spline_normalization
lib5c.algorithms.thresholding
lib5c.algorithms.trimming
lib5c.algorithms.variance
lib5c.algorithms.variance.combined
lib5c.algorithms.variance.cross_rep
lib5c.algorithms.variance.deviation
lib5c.algorithms.variance.estimate_variance
lib5c.algorithms.variance.local
lib5c.algorithms.variance.lognorm_dispersion
lib5c.algorithms.variance.mle
lib5c.algorithms.variance.nbinom_dispersion
lib5c.contrib
lib5c.contrib.iced
lib5c.contrib.iced.balancing
lib5c.contrib.interlap
lib5c.contrib.interlap.util
lib5c.contrib.luigi
lib5c.contrib.luigi.config
lib5c.contrib.luigi.pipeline
lib5c.contrib.luigi.tasks
lib5c.contrib.pybigwig
lib5c.contrib.pybigwig.bigwig
lib5c.contrib.seaborn
lib5c.core
lib5c.core.interactions
lib5c.core.loci
lib5c.core.mixins
lib5c.operators
lib5c.operators.base
lib5c.operators.modeling
lib5c.operators.qnorm
lib5c.operators.standardization
lib5c.operators.trimming
lib5c.parsers
lib5c.parsers.bed
lib5c.parsers.bias
lib5c.parsers.config
lib5c.parsers.counts
lib5c.parsers.genes
lib5c.parsers.hic
lib5c.parsers.loops
lib5c.parsers.primer_names
lib5c.parsers.primers
lib5c.parsers.scaled
lib5c.parsers.table
lib5c.parsers.util
lib5c.plotters
lib5c.plotters.asymmetric_colormap
lib5c.plotters.bias_heatmaps
lib5c.plotters.boxplots
lib5c.plotters.clustering
lib5c.plotters.colormaps
lib5c.plotters.colorscales
lib5c.plotters.convergency
lib5c.plotters.correlation
lib5c.plotters.curve_fits
lib5c.plotters.distance_dependence
lib5c.plotters.distribution
lib5c.plotters.enrichment
lib5c.plotters.expected
lib5c.plotters.extendable
lib5c.plotters.extendable.base_extendable_heatmap
lib5c.plotters.extendable.bed_extendable_heatmap
lib5c.plotters.extendable.chipseq_extendable_heatmap
lib5c.plotters.extendable.cluster_extendable_heatmap
lib5c.plotters.extendable.domain_extendable_heatmap
lib5c.plotters.extendable.extendable_figure
lib5c.plotters.extendable.extendable_heatmap
lib5c.plotters.extendable.gene_extendable_heatmap
lib5c.plotters.extendable.legend_extendable_heatmap
lib5c.plotters.extendable.motif_extendable_heatmap
lib5c.plotters.extendable.rectangle_extendable_heatmap
lib5c.plotters.extendable.ruler_extendable_heatmap
lib5c.plotters.extendable.snp_extendable_heatmap
lib5c.plotters.fits
lib5c.plotters.heatmap
lib5c.plotters.matrix
lib5c.plotters.pca
lib5c.plotters.queried_counts_heatmap
lib5c.plotters.scatter
lib5c.plotters.splines
lib5c.plotters.variance
lib5c.structures
lib5c.structures.dataset
lib5c.tools
lib5c.tools.bias_heatmap
lib5c.tools.bin
lib5c.tools.boxplot
lib5c.tools.colorscale
lib5c.tools.convergency
lib5c.tools.correlation
lib5c.tools.dd_curve
lib5c.tools.determine_bins
lib5c.tools.distribution
lib5c.tools.divide
lib5c.tools.enrichment
lib5c.tools.expected
lib5c.tools.express
lib5c.tools.heatmap
lib5c.tools.helpers
lib5c.tools.hic_extract
lib5c.tools.iced
lib5c.tools.interaction_score
lib5c.tools.kr
lib5c.tools.lib5c_toolbox
lib5c.tools.log
lib5c.tools.outliers
lib5c.tools.parents
lib5c.tools.pca
lib5c.tools.pipeline
lib5c.tools.pvalue_histogram
lib5c.tools.pvalues
lib5c.tools.qnorm
lib5c.tools.qvalues
lib5c.tools.remove
lib5c.tools.smooth
lib5c.tools.spline
lib5c.tools.subtract
lib5c.tools.threshold
lib5c.tools.trim
lib5c.tools.variance
lib5c.tools.visualize_fits
lib5c.tools.visualize_splines
lib5c.tools.visualize_variance
lib5c.util
lib5c.util.annotationmap
lib5c.util.ast_eval
lib5c.util.bed
lib5c.util.bedgraph
lib5c.util.config
lib5c.util.counts
lib5c.util.counts_superdict
lib5c.util.demo_data
lib5c.util.dictionaries
lib5c.util.distributions
lib5c.util.donut
lib5c.util.grouping
lib5c.util.lowess
lib5c.util.lru_cache
lib5c.util.mathematics
lib5c.util.metrics
lib5c.util.optimization
lib5c.util.parallelization
lib5c.util.plotting
lib5c.util.pretty_decorator
lib5c.util.primers
lib5c.util.sampling
lib5c.util.scales
lib5c.util.slicing
lib5c.util.sorting
lib5c.util.statistics
lib5c.util.stratification
lib5c.util.system
lib5c.util.table
lib5c.writers
lib5c.writers.bedgraph
lib5c.writers.bias
lib5c.writers.config
lib5c.writers.correlation
lib5c.writers.counts
lib5c.writers.hic
lib5c.writers.pca
lib5c.writers.primers
lib5c.writers.table
lib5c.writers.wustl