API specification and conceptual documentation

This section describes the most important data structures and functions in more detail than the tutorial.

Contents:

• Core data structures and file types
• Parallelization across regions
• Plotting
• Trimming
• Quantile normalization
• Bias mitigation
• Binning and smoothing
• Expected modeling
• Variance modeling
• Distributions
• Thresholding
• Enrichments
• Clustering