"""
Utility functions related to table files.
"""
[docs]def make_fflj_id_map(primermap):
"""
Creates a map from unique FFLJ or bin-bin pair IDs to (region, row, column)
coordinate tuples.
Parameters
----------
primermap : primermap or pixelmap
Defines the fragments or bins that will get IDs assigned.
Returns
-------
Dict[str, Tuple]
The keys are FFLJ or bin-bin pair IDs as strings. The values are
(region, row, column) coordinate tuples.
"""
fflj_id_map = {}
for region in primermap:
for i in range(len(primermap[region])):
for j in range(i + 1):
fflj_id = '%s_%s' % (primermap[region][j]['name'],
primermap[region][i]['name'])
coords = (region, i, j)
fflj_id_map[fflj_id] = coords
return fflj_id_map