lib5c.parsers.table module¶
Module for parsing table files, which function as a simple extension of .counts files to multiple replicates.
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lib5c.parsers.table.
load_table
(filename, primermap, sep='\t', dtype=<class 'float'>)[source]¶ Loads a table into a counts_superdict structure.
- Parameters
filename (str) – The table file to load.
primermap (primermap or pixelmap) – Defines the FFLJs or bin-bin pairs.
sep (str) – The separator used in the table file.
dtype (numpy-compatible dtype) – The dtype to use when constructing the arrays in the counts_superdict.
- Returns
The loaded counts_superdict.
- Return type
counts_superdict